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1.
Mycoses ; 67(2): e13699, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-38366288

RESUMO

BACKGROUND: Superficial mycoses are fungal infections limited to the outermost layers of the skin and its appendages. The chief causative agents of these mycoses are dermatophytes and yeasts. The diagnosis of dermatophytosis can be made by direct mycological examination with potassium hydroxide (10%-30%) of biological material obtained from patients with suspected mycosis, providing results more rapid than fungal cultures, which may take days or weeks. This information, together with clinical history and laboratory diagnosis, ensures that the appropriate treatment is initiated promptly. However, false negative results are obtained in 5%-15%, by conventional methods of diagnosis of dermatophytosis. OBJECTIVES: To study the metabolic profiles of the commonly occurring dermatophytes by NMR spectroscopy. PATIENTS/MATERIALS: We have used 1D and 2D Nuclear Magnetic Resonance (NMR) experiments along with Human Metabolome Database (HMDB) and Chenomx database search for identification of primary metabolites in the methanol extract of two fungal species: Trichophyton mentagrophyte (T. mentagrophyte) and Trichophyton rubrum (T. rubrum). Both standard strains and representative number of clinical isolates of these two species were investigated. Further, metabolic profiles obtained were analysed using multivariate analysis. RESULTS: We have identified 23 metabolites in the T. mentagrophyte and another 23 metabolites in T. rubrum. Many important metabolites like trehalose, proline, mannitol, acetate, GABA and several other amino acids were detected, which provide the necessary components for fungal growth and metabolism. Altered metabolites were defined between Trichophyton mentagrophyte and T. rubrum strains. CONCLUSION: We have detected many metabolites in the two fungal species T. mentagrophyte and T. rubrum by using NMR spectroscopy. NMR spectroscopy provides a holistic snapshot of the metabolome of an organism. Key metabolic differences were identified between the two fungal strains. We need to perform more studies on metabolite profiling of the samples from these species for their rapid diagnosis and prompt treatment.


Assuntos
Arthrodermataceae , Dermatomicoses , Tinha , Humanos , Trichophyton , Dermatomicoses/microbiologia , Tinha/diagnóstico , Tinha/microbiologia , Espectroscopia de Ressonância Magnética
2.
J Magn Reson ; 342: 107267, 2022 09.
Artigo em Inglês | MEDLINE | ID: mdl-35853368

RESUMO

Limited chemical shift dispersion and broad multiplet patterns limit resolution in 1H NMR spectra. J-Resolved spectroscopy overcomes this problem to a great extent. However, the phase-twist line shape in J-Resolved spectroscopy allows only the magnitude mode of the experiment to be practical, which degrades resolution. Recently, various pure shift or broadband homonuclear decoupling approaches have been integrated with J-Resolved spectroscopy to eliminate the broad dispersive contribution. In the present work, we demonstrate a broadband 1H-1H J-Resolved spectrum with a greatly reduced dispersive contribution using the concept of slice selection. We show that slice selective excitation, t1 encoding, storage, and detection of the in-phase absorptive signals can be executed, while a gradient-based suppression of the dispersive antiphase signals can be performed during the storage period. In more than two spin systems, a small part of the doubly antiphase absorptive signal may also contribute to the spectrum in addition to the inphase absorptive signals. The overall effect is a reduced multiplet pattern similar to a regular J-Resolved case as the passive spins remain unflipped due to slice selective pulses. However, the effect is broadband for a fraction of the spins when all slices are considered analogous to Zangger-Sterk (ZS) broadband homo-decoupling. Further, the fresh magnetization from neighboring slices can be accessed in different scans by frequency shifting of the slice selective pulses without a recycle delay-an elegant aspect of the ZS pulse element. This allows faster signal averaging, improving sensitivity which depends on the T1 relaxation time of the signals. This method displays sensitivity up to 4-20 percent of the regular J-RES 1H signals.


Assuntos
Espectroscopia de Ressonância Magnética , Espectroscopia de Ressonância Magnética/métodos
3.
Metab Brain Dis ; 37(3): 773-785, 2022 03.
Artigo em Inglês | MEDLINE | ID: mdl-35029797

RESUMO

We report the potential role of 1H Nuclear Magnetic Resonance (NMR) based metabolomics in tuberculous meningitis (TBM). We also correlate the significant metabolites with clinical-radiological parameters. Forty-three patients with TBM were included, and their severity of meningitis was graded as stages I to III, and patients with positive Mycobacterium tuberculosis or its nucleic acid was considered as definite TBM. 1H NMR-based metabolomic study was performed on (CSF) samples, and the significant metabolites compared to healthy controls were identified. Outcome at three months was defined as death, poor and good based on the modified Rankin Scale. These metabolites were compared between definite and probable groups of TBM, and also correlated with MRI findings. About 11 metabolites were found to be significant for distinguishing TBM from the controls. In TBM, lactate, glutamate, alanine, arginine, 2-hydroxyisobutyrate, formate, and cis-aconitate were upregulated, and glucose, fructose, glutamine, and myo-inositol were downregulated compared to the controls. For differentiating TBM from the controls, the AUC of the ROC curve generated using these significant metabolites was 0.99, with a 95% confidence interval from 0.96 to 1, demonstrating that these metabolites were able to classify cases with good sensitivity and specificity. Lactate concentration in CSF correlated with hemoglobin, CSF glucose, and infarction. The outcome did not correlate with metabolomics parameters. NMR-based CSF metabolomics have a potential role in differentiating TBM from the controls.


Assuntos
Mycobacterium tuberculosis , Tuberculose Meníngea , Humanos , Imageamento por Ressonância Magnética , Espectroscopia de Ressonância Magnética , Metabolômica , Tuberculose Meníngea/diagnóstico por imagem , Tuberculose Meníngea/microbiologia
4.
Analyst ; 146(21): 6582-6591, 2021 Oct 25.
Artigo em Inglês | MEDLINE | ID: mdl-34586127

RESUMO

CDCl3 is the most frequently used solvent for the NMR investigation of organic compounds. Busy chemistry labs need to investigate hundreds of compounds daily. While 1H NMR investigation takes a couple of minutes, recording 13C NMR spectra necessitates hours of signal averaging due to the low abundance and low sensitivity of 13C nuclei. The longer acquisition time for 13C NMR results in a loss of precious spectrometer time in a shared multi-user environment. A regular 5 mm o.d. NMR tube is the most commonly used tube for NMR in organic chemistry labs and is also the cheapest option. We show that for analytes soluble in the CDCl3 solvent using a regular 5 mm o.d. NMR tube, the speed of 13C observation can be enhanced by a factor of two by resorting to a sample preparation method that employs a biphasic system made of H2O or D2O at the top of another layer of CDCl3. By using the biphasic system of two immiscible solvents, the analyte can be concentrated in the CDCl3 layer (within the more sensitive volume of the NMR coil), resulting in the improvement of the signal to noise ratio (SNR) by a factor of up to 1.8 for 13C and 2D 1H-13C HSQC spectra, which results in more than two-fold reduction in the experimental time. 1H NMR and other 2D NMR also get a sensitivity boost. The amount of CDCl3 required for sample preparation can also be reduced by 40% using this biphasic system (CDCl3/H2O). Sample preparation in such an immiscible biphasic system is effortless and straightforward. The performance of such biphasic samples is closer to that of Shigemi tubes and better than that of 3 mm o.d. tubes.


Assuntos
Imageamento por Ressonância Magnética , Compostos Orgânicos , Espectroscopia de Ressonância Magnética , Razão Sinal-Ruído , Solventes
5.
J Proteome Res ; 19(9): 3668-3679, 2020 09 04.
Artigo em Inglês | MEDLINE | ID: mdl-32660248

RESUMO

Hepatic encephalopathy (HE) is a debilitating neuropsychiatric complication associated with acute and chronic liver failure. It is characterized by diverse symptoms with variable severity that includes cognitive and motor deficits. The aim of the study is to assess metabolic alterations in the brain and liver using nuclear magnetic resonance (NMR) spectroscopy and subsequent multivariate analyses to characterize metabolic signatures associated with HE. HE was developed by bile duct ligation (BDL) that resulted in hepatic dysfunctions and cirrhosis as shown by liver function tests. Metabolic profiles from control and BDL rats indicated increased levels of lactate, branched-chain amino acids (BCAAs), glutamate, and choline in the liver, whereas levels of glucose, phenylalanine, and pyridoxine were decreased. In brain, the levels of lactate, acetate, succinate, citrate, and malate were increased, while glucose, creatine, isoleucine, leucine, and proline levels were decreased. Furthermore, neurotransmitters such as glutamate and GABA were increased, whereas choline and myo-inositol were decreased. The alterations in neurotransmitter levels resulted in cognitive and motor defects in BDL rats. A significant correlation was found among alterations in NAA/choline, choline/creatine, and NAA/creatine with behavioral deficits. Thus, the data suggests impairment in metabolic pathways such as the tricarboxylic acid (TCA) cycle, glycolysis, and ketogenesis in the liver and brain of animals with HE. The study highlights that metabolic signatures could be potential markers to monitor HE progression and to assess therapeutic interventions.


Assuntos
Encefalopatia Hepática , Animais , Encéfalo/diagnóstico por imagem , Encefalopatia Hepática/etiologia , Espectroscopia de Ressonância Magnética , Espectroscopia de Prótons por Ressonância Magnética , Ratos
6.
J Magn Reson ; 311: 106684, 2020 02.
Artigo em Inglês | MEDLINE | ID: mdl-31931343

RESUMO

The heteronuclear multiple-quantum coherence in the indirect dimension of the two-dimensional HMQC experiment evolves under the passive 1H-1H J-couplings leading to multiplet structures in the F1 dimension. Besides, 1H-1H J-multiplets appear in the direct dimension as well. Thus, multiplets along both dimensions lower the resolution and sensitivity of this technique, when high resolution is required along both dimensions. An efficient broadband homodecoupling scheme along the F1 dimension of the HMQC experiment has not been realized to date. We have implemented broadband homonuclear decoupling using bilinear rotation decoupling (BIRD) by adding a 1H SQ evolution period followed by BIRD before the 1H-13C multiple-quantum evolution period in the HMQC. In the direct time domain, BIRD is implemented using a real-time or single-scan scheme, which further improves resolution and sensitivity of this technique. The resulting pure shift HMQC provides singlet peak per chemical site along F1 as well as F2 axes and, hence, better resolution and sensitivity than conventional HMQC spectrum for all peaks except diastereotopic methylene protons. Due to the incorporation of the BIRD, the indirect time domain becomes double in length compared to the conventional HMQC. However, slow relaxation of small molecules favors better sensitivity for ps-HMQC relative to conventional HMQC under all conditions. We also found that the sensitivity of ps-HMQC is only slightly less than ps-HSQC for small molecules.

7.
J Magn Reson ; 301: 19-29, 2019 04.
Artigo em Inglês | MEDLINE | ID: mdl-30844690

RESUMO

Two-dimensional J-RESolved spectroscopy (J-RES) finds routine use in metabolomics for reducing signal overlap as it separates chemical shift and multiplet information along two frequency axes. However, only magnitude mode of the experiment is practical which prevents exploitation of its full resolving power. Tailing from high-intensity metabolite peaks often obscure nearby low-intensity metabolite peaks which leads to ambiguity in assignment of metabolites. Absorptive mode J-RES spectroscopy offers better-resolving power but comes at the cost of either sensitivity or complicated post-processing. Quite often for certain complex mixtures such as bio-fluids some components of the mixture display intense singlet signals which dominate the whole spectrum resulting in less reliable detection of weaker metabolite signals. Multi-frequency presaturation could suppress these intense singlets but will also remove the useful weaker multiplet peaks which are either totally eclipsed with the intense singlets or very close in frequency. We show that by using a double quantum filter (DQF) in magnitude mode J-RES technique, the intensity of the strong singlet metabolite peaks can be reduced relative to the intensity of the sparsely present multiplet metabolite signals. This approach leads to the identification of many weak intensity multiplet peaks which are otherwise undetected due to their overlap with intense singlet peaks in regular J-RES as well as 1D 1H spectra. Although the improved intensity of most of the weaker peaks relative to the strong singlet peaks is observed, some multiplets can disappear due to the delay-dependent modulation of the signals by the DQF. A few DQF J-RES spectra recorded with different DQF delays, therefore, produce better assignment when analyzed together. The technique is demonstrated on a mixture of eight compounds, human urine, and plant extract samples.


Assuntos
Misturas Complexas/química , Ressonância Magnética Nuclear Biomolecular/métodos , Algoritmos , Liofilização , Garcinia/química , Humanos , Metabolismo , Metabolômica , Extratos Vegetais/química , Teoria Quântica , Urina/química
8.
Magn Reson Chem ; 57(6): 304-316, 2019 06.
Artigo em Inglês | MEDLINE | ID: mdl-30762898

RESUMO

NMR is a fast method for obtaining a holistic snapshot of the metabolome and also offers quantitative information without separating the compounds present in a complex mixture. Identification of the metabolites present in a plant extract sample is a crucial step for all plant metabolomics studies. In the present work, we used various two dimensional (2D) NMR methods such as J-resolved NMR, total correlation spectroscopy (TOCSY), and heteronuclear single quantum coherence sensitivity enhanced NMR spectroscopy for the identification of 36 common metabolites present in Coriandrum sativum L. seed extract. The identified metabolites belong to the following classes: organic acids, amino acids, and carbohydrates. 1 H NMR spectra of such complex mixtures in general display tremendous signal overlap due to the presence of a large number of metabolites with closely resonating multiplet signals. This signal overlapping leads to ambiguity in an assignment, and hence, identification of metabolites becomes tedious or impossible in many cases. Therefore, the utility of pure-shift proton spectrum along the indirect (F1 ) dimension of the F1 -PSYCHE-TOCSY spectrum is demonstrated for overcoming ambiguity in assignment of metabolites in crowded spectral regions from Coriandrum sativum L. seed extract sample. Because pure-shift NMR methods yield ultrahigh resolution spectrum (i.e., a singlet peak per chemical site) along one or more dimensions, such spectra provide better identification of metabolites compared with regular 2D TOCSY where signal overlap and peak distortions lead to ambiguity in the assignment. Nine metabolites were unambiguously assigned by pure-shift F1 -PSYCHE-TOCSY spectrum, which was unresolved in regular TOCSY spectrum.


Assuntos
Coriandrum/química , Espectroscopia de Ressonância Magnética/métodos , Metaboloma , Extratos Vegetais/química , Sementes/química , Coriandrum/metabolismo , Sementes/metabolismo
9.
Magn Reson Chem ; 56(10): 876-892, 2018 10.
Artigo em Inglês | MEDLINE | ID: mdl-29411898

RESUMO

Enantiodiscrimination and their quantification using nuclear magnetic resonance (NMR) spectroscopy has always been a subject of great interest. Proton is the nucleus of choice for enantiodiscrimination due to its high sensitivity and ubiquitous presence in nature. Despite its advantages, enantiodiscrimination suffers from extensive signal splitting by the proton-proton scalar couplings, which give complex multiplets that spread over a frequency range of some tens of hertz. These multiplets often overlap, further complicating interpretation of the spectra and quantifications. In the present review, we discuss some of the recent developments in the pure shift 1 H NMR based methods for enantiomer resolution and enantiodiscrimination. We also compare various pure shift methods used for enantiodiscrimination and measurement of enantiomeric excess, considering the fact that conventional 1 H NMR fails to provide any detailed insight.

10.
Biochim Biophys Acta Gen Subj ; 1862(3): 485-494, 2018 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-29107813

RESUMO

We report, based on biophysical studies and molecular mechanical calculations that curcumin binds DNA hairpin in the minor groove adjacent to the loop region forming a stable complex. UV-Vis and fluorescence spectroscopy indicated interaction of curcumin with DNA hairpin. In this novel binding motif, two É£ H of curcumin heptadiene chain are closely positioned to the A16-H8 and A17-H8, while G12-H8 is located in the close proximity of curcumin α H. Molecular dynamics (MD) simulations suggest, the complex is stabilized by noncovalent forces including; π-π stacking, H-bonding and hydrophobic interactions. Nuclear magnetic resonance (NMR) spectroscopy in combination with molecular dynamics simulations indicated curcumin is bound in the minor groove, while circular dichroism (CD) spectra suggested minute enhancement in base stacking and a little change in DNA helicity, without significant conformational change of DNA hairpin structure. The DNA:curcumin complex formed with FdU nucleotides rather than Thymidine, demonstrated enhanced cytotoxicity towards oral cancer cells relative to the only FdU substituted hairpin. Fluorescence co-localization demonstrated stability of the complex in biologically relevant conditions, including its cellular uptake. Acridine orange/EtBr staining further confirmed the enhanced cytotoxic effects of the complex, suggesting apoptosis as mode of cell death. Thus, curcumin can be noncovalently complexed to small DNA hairpin for cellular delivery and the complex showed increased cytotoxicity in combination with FdU nucleotides, demonstrating its potential for advanced cancer therapy.


Assuntos
Anticarcinógenos/farmacologia , Antineoplásicos Fitogênicos/farmacologia , Curcumina/farmacologia , DNA/efeitos dos fármacos , Floxuridina/farmacologia , Anticarcinógenos/química , Antineoplásicos Fitogênicos/química , Apoptose/efeitos dos fármacos , Linhagem Celular Tumoral , Dicroísmo Circular , Curcumina/química , Sinergismo Farmacológico , Floxuridina/metabolismo , Humanos , Modelos Moleculares , Simulação de Dinâmica Molecular , Ressonância Magnética Nuclear Biomolecular , Conformação de Ácido Nucleico/efeitos dos fármacos , Espectrometria de Fluorescência , Espectrofotometria Ultravioleta
11.
RSC Adv ; 8(36): 19990-19999, 2018 May 30.
Artigo em Inglês | MEDLINE | ID: mdl-35541648

RESUMO

Recently, pure shift NMR methods have delivered ultrahigh resolution broadband proton NMR spectra that display singlet peak per chemical site. BASH/HOBS (band selective homo-decoupling/homonuclear band selective) decoupling is the only method that provides singlet only spectrum for a selected signal or a group of signals with a sensitivity higher than regular proton NMR, and an order of magnitude higher than broadband pure shift techniques. It is this aspect that makes this technique important. In the present work, we show that perfect echo (PE) when combined with band selective homo-decoupling (BASHD) permits increasing the bandwidth of the BASH/HOBS decoupling resulting in reduced experimental time for this class of experiments. Using new PE-BASHD technique two closely resonating coupled signals could be decoupled in a single experiment which otherwise demands two separate BASHD experiments. In polypeptides, it also allows decoupling of Hα and HN signals simultaneously from each other as well as from the side chain protons reducing experimental time. Further, pseudo 2D based PE-BASHD scheme provides spectrum superior to the real-time BASHD spectrum when applied to closely resonating coupled signals. Numerical simulation as well as experimental results indicate that the PE-BASHD sequence display good quality singlet only spectrum even in the presence of moderate strong coupling.

12.
J Magn Reson ; 284: 80-85, 2017 11.
Artigo em Inglês | MEDLINE | ID: mdl-28963919

RESUMO

A method is demonstrated for parallel acquisition of several slice selective soft COSY proton spectra. Application of a slice selective mixing pulse in a selective correlation experiment allows slice selective coherence transfer between different coupled spin pairs. During such slice selective coherence transfer, the spin states of the passive spins are undisturbed. In other words, slice selective coherence transfer executes spin-state selective coherence transfer between a given spin and all its coupled neighbours. This results in a final spectrum which contains multiple soft cosy spectra between a given signal(s) and all its coupled signals, significantly reducing experimental time. This provides access to all the couplings for a given proton site and its coupled partners.

13.
NMR Biomed ; 30(10)2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-28759166

RESUMO

Traumatic brain injury (TBI) has been shown to affect hippocampus-associated learning, memory and higher cognitive functions, which may be a consequence of metabolic alterations. Hippocampus-associated disorders may vary depending on the severity of injury [mild TBI (miTBI) and moderate TBI (moTBI)] and time since injury. The underlying hippocampal metabolic irregularities may provide an insight into the pathological process following TBI. In this study, in vivo and in vitro proton magnetic resonance spectroscopy (1 H-MRS) data were acquired from the hippocampus region of controls and TBI groups (miTBI and moTBI) at D0 (pre-injury), 4 h, Day 1 and Day 5 post-injury (PI). In vitro MRS results indicated trauma-induced changes in both miTBI and moTBI; however, in vivo MRS showed metabolic alterations in moTBI only. miTBI and moTBI showed elevated levels of osmolytes indicating injury-induced edema. Altered levels of citric acid cycle intermediates, glutamine/glutamate and amino acid metabolism indicated injury-induced aberrant bioenergetics, excitotoxicity and oxidative stress. An overall similar pattern of pathological process was observed in both miTBI and moTBI, with the distinction of depleted N-acetylaspartate levels (indicating neuronal loss) at 4 h and Day 1 and enhanced lactate production (indicating heightened energy depletion leading to the commencement of the anaerobic pathway) at Day 5 in moTBI. To the best of our knowledge, this is the first study to investigate the hippocampus metabolic profile in miTBI and moTBI simultaneously using in vivo and in vitro MRS.


Assuntos
Lesões Encefálicas Traumáticas/metabolismo , Hipocampo/metabolismo , Metaboloma , Animais , Análise Discriminante , Hipocampo/patologia , Análise dos Mínimos Quadrados , Espectroscopia de Ressonância Magnética , Masculino , Redes e Vias Metabólicas , Análise de Componente Principal , Espectroscopia de Prótons por Ressonância Magnética , Ratos Sprague-Dawley
14.
Chemphyschem ; 18(21): 3076-3082, 2017 Nov 03.
Artigo em Inglês | MEDLINE | ID: mdl-28833930

RESUMO

A diagonal suppressed F1 decoupled total correlation spectroscopy(TOCSY) experiment is developed for analyses of complex mixtures. In 2D homonuclear correlation, assignment of the cross peaks is crucial for structure elucidation. However, when cross peaks are close to the diagonal peaks in overcrowded spectral regions, their assignment becomes tedious. In complex mixtures, the presence of multiple spectra along with broad and complex proton multiplets owing to homonuclear scalar couplings degrade the resolution to the extent that assignment of various cross peaks becomes tedious or impossible. Herein, a diagonal suppressed total correlation technique with F1 decoupling is presented to improve the resolution of the cross peaks. The resolution of the cross peaks is improved by both diagonal suppression as well as the collapse of the multiplets to singlets. Application of the method to a few mixtures of organic compounds reveals better identification of the cross peaks relative to other TOCSY variants.

15.
Magn Reson Chem ; 55(6): 553-558, 2017 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-27813168

RESUMO

The small chemical shift dispersion and complex multiplicity pattern in proton NMR limit quantifications, for instance the determination of enantiomeric excess (ee) for an enantiomeric mixture. Herein, we present a simple proton-proton correlation experiment with band selective homonuclear (BASH) decoupling in both F1 and F2 dimensions, for the removal of scalar and residual dipolar couplings to provide collapsed singlet for each chemical site. The method has been demonstrated to separate the severely overlapped spectra of enantiomers using both chiral isotropic and anisotropic phases as well as a small biomolecule, particularly for the diastereotopic protons and also for the determination of ee. Copyright © 2016 John Wiley & Sons, Ltd.

16.
J Magn Reson ; 266: 51-8, 2016 05.
Artigo em Inglês | MEDLINE | ID: mdl-27026651

RESUMO

"Pure shift" NMR spectra display singlet peak per chemical site. Thus, high resolution is offered at the cost of valuable J-coupling information. In the present work, real-time BIRD (BIlinear Rotation Decoupling) is applied to the absorptive-mode 2D J-spectroscopy to provide pure shift spectrum in the direct dimension and J-coupling information in the indirect dimension. Quite often in metabolomics, proton NMR spectra from complex bio-fluids display tremendous signal overlap. Although conventional J-spectroscopy in principle overcomes this problem by separating the multiplet information from chemical shift information, however, only magnitude mode of the experiment is practical, sacrificing much of the potential high resolution that could be achieved. Few J-spectroscopy methods have been reported so far that produce high-resolution pure shift spectrum along with J-coupling information for crowded spectral regions. In the present work, high-quality J-resolved spectrum from important metabolomic mixture such as tissue extract from rat cortex is demonstrated. Many low-intensity metabolite peaks which are obscured by the broad dispersive tails from high-intensity metabolite peaks in regular magnitude mode J-spectrum can be clearly identified in real-time BIRD J-resolved spectrum. The general practice of removing such spectral overlap is tedious and time-consuming as it involves repeated sample preparation to change the pH of the tissue extract sample and subsequent spectra recording.


Assuntos
Algoritmos , Encéfalo/metabolismo , Metaboloma/fisiologia , Ressonância Magnética Nuclear Biomolecular/métodos , Processamento de Sinais Assistido por Computador , Animais , Sistemas Computacionais , Ratos , Reprodutibilidade dos Testes , Rotação , Sensibilidade e Especificidade
17.
Chemphyschem ; 16(12): 2687-91, 2015 Aug 24.
Artigo em Inglês | MEDLINE | ID: mdl-26175136

RESUMO

Real-time band-selective homonuclear (1) H decoupling during data acquisition of z-filtered J-resolved spectroscopy produces (1) H-decoupled (1) H NMR spectra and leads to sensitivity enhancement and improved resolution, and thus aids the measurement of J couplings and residual dipolar couplings in crowded regions of (1) H NMR spectrum. High quality spectra from peptides, organic molecules, and also from enantiomers dissolved in weakly aligned chiral media are reported.


Assuntos
Prótons , Análise Espectral/métodos
18.
J Magn Reson ; 256: 52-59, 2015 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-26001137

RESUMO

Homonuclear correlated spectroscopy such as COSY and TOCSY provides crucial structural information. In all homonuclear correlation, the most intense peaks are represented by the diagonal. As a result, the useful cross peaks close to the diagonal get obscured by the huge tails of diagonal peaks. Herein, we show that by editing the proton magnetization by a 13C nucleus in natural abundance, it is possible to eliminate the inphase coherence or untransferred magnetization that leads to the diagonal peak while retaining the antiphase coherence or transferred magnetization required for creation of cross peak. After the coherence transfer step, the untransferred magnetization directly attached to 13C evolves under one bond heteronuclear coupling while the transferred transverse magnetization directly attached to remote 12C does not. As a result, the untransferred magnetization directly attached to 13C can be converted to an unobservable heteronuclear multiple quantum coherence leading to a diagonal free correlated spectrum with a sensitivity penalty of two orders of magnitude but comparable to HSQC kind of experiments at natural abundance. The method demonstrated for COSY and TOCSY allows all proton-proton correlations to be observed except the geminal proton-proton correlations. Further, protons directly attached to heteronuclei other than 13C must be scalar coupled to protons directly attached to 13C to have a detectable cross peak.

19.
J Magn Reson ; 252: 41-8, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25647631

RESUMO

Zero-Quantum artifacts seriously degrade the performance of 2D NOESY. Homonuclear J-evolution during t(1) period generates Zero-Quantum and other higher quantum coherences which represent the magnetization loss and the artifacts created. We demonstrate that creation of such artifacts itself can be prevented for shorter t1 period by a perfect echo based decoupling technique during t1 period in a single scan. This is in contrast to existing methods that create unwanted coherence, and subsequently suppress that to produce a clean spectrum with a sensitivity penalty. Although decoupling performance of the present scheme remains robust for echo time 2τ short compared to 1/2J, we show that even a partial decoupling effect for extended t(1) (=2τ) period up to 100 ms along with a Zero-Quantum filter generates NOE spectrum from Cyclosporine A, in which majority of the cross peaks displayed partial sensitivity enhancement with few exceptions. However, in crowded proton spin systems like menthol, the enhancements were not observed and perfect echo NOESY displays similar performance as Zero-Quantum filtered NOESY.


Assuntos
Algoritmos , Artefatos , Peptídeos/química , Espectroscopia de Prótons por Ressonância Magnética/métodos , Processamento de Sinais Assistido por Computador , Peptídeos/análise , Teoria Quântica , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Marcadores de Spin
20.
J Magn Reson ; 242: 143-54, 2014 May.
Artigo em Inglês | MEDLINE | ID: mdl-24650727

RESUMO

A "perfect echo" based INEPT experiment that demonstrates more efficient heteronuclear polarization transfer over conventional INEPT has been developed. This scheme refocuses the effect of homonuclear (1)H-(1)H J-evolution and simultaneously allows heteronuclear (13)C-(1)H J-evolution to continue during INEPT. This improves one bond heteronuclear polarization transfer efficiency at longer INEPT transfer delays and also enhances the sensitivity of long range INEPT. The refocusing of homonuclear (1)H-(1)H J-coupling could be achieved by doubling the INEPT transfer period leading to a doubling of T2 losses. Therefore, the sensitivity gain is observed when loss of magnetization due to homonuclear (1)H-(1)H J-modulation is more severe than that of T2 decay. However, in general, INEPT transfer period is rather short compared to the longer T2 observed in small molecules. The long range PE-INEPT transfer to carbonyl carbon in beta-butyrolactone, showed much faster build up of C-13 signal than conventional long range INEPT as the long range heteronuclear J-coupling is comparable in magnitude to homonuclear (1)H-(1)H J-coupling in this case. For one bond heteronuclear polarization transfer at shorter delay, PE-INEPT and conventional INEPT displays equal transfer efficiency. Efficient polarization transfer is observed for small molecules dissolved in isotropic as well as weakly aligned media. Further, simulation results obtained using the full propagator and product operator analysis agree well with the experimental observations.


Assuntos
Algoritmos , Modelos Químicos , Espectroscopia de Prótons por Ressonância Magnética/métodos , Processamento de Sinais Assistido por Computador , Simulação por Computador , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
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